Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887108.1_cds_XP_016441413.1_36773
CDS Infomation

[gene=LOC107767005] [db_xref=GeneID:107767005] [protein=patellin-4-like] [protein_id=XP_016441413.1] [location=join(2581..3354,3454..3578,3666..3807,4650..4913)] [gbkey=CDS]
Sequence

ATGCGGGAGGAAGCTGTTGTGCCTGTGGATATAATTGATGATATGAGCAGTGAAAATGAT
GATATTGATGATGAACAACAACATATCTCTGATCAGCCTGCAGGCCAATTAGCTTGTCCT
CTTGACCTGAAATCTTCAAGAATAAACGCTTTGCTTAGATTACGATGTAGGGTTGAAGAC
GCCATTCTTGGTGGTTACATTTACGGCAAAAATAAACACAAGTCGCTCTCTTCCAGATTA
TGTATTACAGAAGATTTGAGGGACATTTCTTTATGGGGTGTTCCTTTATTGCCAAGTAAA
GGGAACCCTAGCACGGATATTGTTTTGATGAATTTCTTGAGAGCCAAGGATTACAGCGTT
TACGACGCGTTCAAGATGCTGCGAAAGACGTTGAGATGGAGGAGAGATTTTAGGGTTGCT
GATATTCTTGAGGAGAAATTTAGTCCTGAGCTTGAGAGTTTGTGGTACACAAATGGTAAG
GACAAAGAAGGCAGGCTTTTGTGTTATAATGTGTTTAGGAATATAAAGAATAAAGAATTG
GAAGAGGAAATTTGGGGTAGGCATCATCACCACCAAGAATGTCTTAGGTGGAGAGTACAT
ATTATGGAGAAAGCAATTCAACAACTTGATTTTAAACAAGGAGGGGTTAATTCCATTCTT
CAGATTATTGATTTGGGAAATTCACCAGGAAATTCATGGAAAGAGGTTCGTTGGATTAAT
AGGAAAATGATGAGCTTGGTTCATGATCATTATCCTGGAATCATCTACAAGAATATATTC
ATTAATGTTCCTGTTTGGTTTTCAACGGTCCATGCACTTAACTTGAGAATGATCACACAA
AGAAGCAAGAACACGTTCATATTTGTGAAGCCATCAAAAGTTACAGAGACCCTTCTCAAG
TATATTAGCCCGGAAAACTTATTGGCTCATTATGGTGGACTCAAAACAGAGAATGATGTT
GAGTTTTCAACTGATGACAAAGTTCTAGAGATAAGCCTCAAACCATGCTCTATTGGCCTC
ATTAAAATACCTGTCAAAGAGGTTGAAGTGACCATAACATGGGATATGATGGTGGTGGGA
AATGAAGTTACTTACAGAGAAGAATTCATACCAGATGATGATTGCTCATACGGAGTTTTG
CTTCAAGAAGAGAAGAAAATGGTGGACAGTGTACGCAATTCCTTTCATATTAGAGAAGAA
GGGAAGATTGTGATCACTATTGATAATCCTACGTACAAGAAGAAAACAGCATTCTACAGA
TACAAGACTAAACCTAGTGTACCCATTTATATGTACCTAAAGTAA

Peptide Sequence

PEP ID

XP_016441413.1
PEP Infomation

PREDICTED: patellin-4-like [Nicotiana tabacum]
Sequence

MREEAVVPVDIIDDMSSENDDIDDEQQHISDQPAGQLACPLDLKSSRINALLRLRCRVED
AILGGYIYGKNKHKSLSSRLCITEDLRDISLWGVPLLPSKGNPSTDIVLMNFLRAKDYSV
YDAFKMLRKTLRWRRDFRVADILEEKFSPELESLWYTNGKDKEGRLLCYNVFRNIKNKEL
EEEIWGRHHHHQECLRWRVHIMEKAIQQLDFKQGGVNSILQIIDLGNSPGNSWKEVRWIN
RKMMSLVHDHYPGIIYKNIFINVPVWFSTVHALNLRMITQRSKNTFIFVKPSKVTETLLK
YISPENLLAHYGGLKTENDVEFSTDDKVLEISLKPCSIGLIKIPVKEVEVTITWDMMVVG
NEVTYREEFIPDDDCSYGVLLQEEKKMVDSVRNSFHIREEGKIVITIDNPTYKKKTAFYR
YKTKPSVPIYMYLK

Transcript Sequence

Gene sequence data has not been registered.